Aquaculture 2022

February 28 - March 4, 2022

San Diego, California

The Shrimp Genome and Epigenome (ShrimpENCODE) Project 

Wednesday, March 2, 2022 8:30 AM - 5:00 PM Palm 3
Chair: Acacia Alcivar-Warren, Marcos De Donato, Kathy F. J. Tang

  • 8:30 AM
    Acacia Alcivar-Warren

    THE SHRIMP GENOME AND EPIGENOME (ShrimpENCODE) PROJECT SESSION: IN MEMORY OF DR. DONALD V. LIGHTNER

  • 8:45 AM
    Fernando Rodriguez

    EPIGENETIC REGULATION IN AQUATIC MICRO-INVERTEBRATES: A NON-CANONICAL SYSTEM OF BACTERIAL ORIGIN

  • 9:15 AM
    Jianbo Yuan

    GENOME SEQUENCING AND ASSEMBLY STRATEGIES AND A COMPARATIVE ANALYSIS OF THE GENOMIC CHARACTERISTICS IN PENAEID SHRIMP SPECIES

  • 9:30 AM
    Gladys Zuniga

    PRELIMINARY SURVEY OF TRANSPOSABLE ELEMENTS FROM THE FIRST SPECIFIC PATHOGEN FREE (SPF) SHRIMP Penaeus vannamei PRODUCED IN THE UNITED STATES

  • 10:30 AM
    Acacia Alcivar-Warren

    THE COMPLETE GENOME OF AN ENDOGENOUS NIMAVIRUS (Nimav-1_LVa) FROM SPECIFIC PATHOGEN-FREE SHRIMP Penaeus vannamei – THE NEED FOR REFERENCE GENOMES OF PENAEIDS AND OTHER CRUSTACEANS

  • 11:00 AM
    Eduardo Martínez-Matus

    VIRUS INTERFERENCE AND OCCURRENCE IN CRUSTACEANS

  • 11:15 AM
    Acacia Alcivar-Warren

    A REVIEW OF WHITE SPOT SYNDROME VIRUS (WSSV) FROM ECUADOR, ENDOGENOUS VIRAL SEQUENCES (EVE) OF WSSV (WSSV-EVE), AND ENDOGENOUS NIMAVIRUS Nima v-1_LVa: THEIR INTEGRATION IN THE GENOMES OF THE FIRST SPECIFIC PATHOGEN-FREE (SPF) Penaeus vannamei DOMESTICATED IN THE UNITED STATES AND P. vannamei FARMED IN CHINA

  • 11:45 AM
    Acacia Alcivar-Warren

    ENDOGENOUS VIRAL ELEMENTS (EVE) OF Decapod penstylhamaparvovirus 1 (INFECTIOUS HYPODERMAL AND HEMATOPOIETIC NECROSIS VIRUS, IHHNV) – IMPLICATIONS FOR SHRIMP DIAGNOSIS

  • 12:15 PM
    Hectorina Rodulfo

    CHROMOSOME LOCATIONS OF RTE-3_LVa NON-LTR RETROTRANSPOSON FROM THE FIRST SPECIFIC PATHOGEN-FREE (SPF) SHRIMP Penaeus vannamei PRODUCED IN THE UNITED STATES – A POTENTIAL SEX MARKER FOR SHRIMP

  • 1:30 PM
    Marcos De Donato

    UNDERSTANDING OF THE SHRIMP IMMUNE RESPONSE TO PATHOGENS FROM ITS TRANSCRIPTOME

  • 2:00 PM
    Baltasar Garcia

    ESTIMATION OF LINKAGE DISEQUILIBRIUM AND EFFECTIVE POPULATION SIZE IN A PACIFIC WHITE SHRIMP Litopenaeus vannamei POPULATION USING A NOVEL 50K SNP GENOTYPING ARRAY

  • 2:15 PM
    Liliana Rojo-Arreola

    THE HURDLES OF DELIVERY CRISPR-Cas9 COMPONENTS FOR GENE EDITING IN PENAEID SHRIMPS

  • 2:30 PM
    Ardhra Gopan

    ASSESSMENT OF THE OXIDATIVE STRESS AND BIO-TRANSFORMATION ENZYMATIC EFFECTS OF GLYPHOSATE EXPOSURE ON THE PACIFIC WHITELEG SHRIMP Penaeus (Litopenaeus) vannamei

  • 2:45 PM
    Sergio F. Nates

    INHIBITORY CAPACITY OF A NOVEL MICROBIAL ENHANCED PROTEIN AGAINST Vibrio spp. IN PACIFIC WHITE SHRIMP Penaeus vannamei

  • 3:15 PM
    Acacia Alcivar-Warren

    THE NonLTR-1_LVa NON-LTR RETROTRANSPOSON FROM THE FIRST SPECIFIC PATHOGEN-FREE (SPF) SHRIMP Penaeus vannamei PRODUCED IN THE UNITED STATES IS SIMILAR TO A RETROTRANSPOSON PUTATIVELY ASSOCIATED WITH ABDOMINAL SEGMENT DEFORMITY DISEASE (ASDD) OF FARMED P. vannamei FROM THAILAND

  • 3:30 PM
    Philip L. Hertzler

    THE DEVELOPMENTAL BIOLOGY OF PENAEID SHRIMP

  • 4:00 PM
    Acacia Alcivar-Warren

    WHITE PAPER: THE NEED TO SEQUENCE THE GENOMES OF Penaeus Fabricius, 1798 SPECIES TO CONFIRM TAXONOMY CLASSIFICATION ACCEPTED BY THE WORLD REGISTER OF MARINE SPECIES (WoRMS)